Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HMGCS2P54868 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 AC012441.2-201ENST00000444843 739 ntBASIC17.35■□□□□ 0.37
HMGCS2P54868 CEP164P1-201ENST00000455142 418 ntBASIC17.35■□□□□ 0.37
HMGCS2P54868 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS2P54868 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS2P54868 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS2P54868 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS2P54868 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS2P54868 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGCS2P54868 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS2P54868 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS2P54868 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS2P54868 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS2P54868 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 FAM90A7P-201ENST00000382628 1395 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS2P54868 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 FAM90A23P-201ENST00000400136 1395 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 LILRP1-201ENST00000444199 1370 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 AL353637.1-201ENST00000451571 732 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.34■□□□□ 0.37
HMGCS2P54868 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 SCARNA21-201ENST00000517026 139 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 IGLV3-15-201ENST00000518356 244 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCS2P54868 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 AC005962.1-201ENST00000584100 773 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 AC008825.2-201ENST00000603374 718 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 MIR7845-201ENST00000618396 99 ntBASIC17.34■□□□□ 0.37
HMGCS2P54868 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS2P54868 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCS2P54868 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS2P54868 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS2P54868 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
HMGCS2P54868 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 AC136759.1-202ENST00000530858 2194 ntBASIC17.33■□□□□ 0.37
HMGCS2P54868 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
HMGCS2P54868 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCS2P54868 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGCS2P54868 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGCS2P54868 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGCS2P54868 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
HMGCS2P54868 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC092978.1-202ENST00000637590 1327 ntBASIC17.33■□□□□ 0.36
HMGCS2P54868 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC253536.4-201ENST00000440539 267 ntBASIC17.33■□□□□ 0.36
HMGCS2P54868 AC073150.1-201ENST00000450406 1084 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms