Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.81□□□□□ -0.04
CLCN2P51788 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLCN2P51788 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.81□□□□□ -0.04
CLCN2P51788 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLCN2P51788 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.81□□□□□ -0.04
CLCN2P51788 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLCN2P51788 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.8□□□□□ -0.04
CLCN2P51788 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.8□□□□□ -0.04
CLCN2P51788 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.8□□□□□ -0.04
CLCN2P51788 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.8□□□□□ -0.04
CLCN2P51788 AC025048.3-201ENST00000590609 569 ntBASIC14.8□□□□□ -0.04
CLCN2P51788 AC005702.4-201ENST00000618393 416 ntBASIC14.8□□□□□ -0.04
CLCN2P51788 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.8□□□□□ -0.04
CLCN2P51788 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLCN2P51788 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.8□□□□□ -0.04
CLCN2P51788 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.79□□□□□ -0.04
CLCN2P51788 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 PCDHA3-202ENST00000532566 4594 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 PIN1P1-201ENST00000412108 996 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.79□□□□□ -0.04
CLCN2P51788 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 CICP17-201ENST00000418553 2377 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 SPTLC1P1-201ENST00000447199 261 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 PHKG1P2-201ENST00000457537 863 ntBASIC14.79□□□□□ -0.04
CLCN2P51788 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLCN2P51788 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCN2P51788 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.79□□□□□ -0.04
CLCN2P51788 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCN2P51788 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLCN2P51788 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
CLCN2P51788 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.79□□□□□ -0.04
CLCN2P51788 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms