Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 VDAC1P7-201ENST00000462417 847 ntBASIC15.9■□□□□ 0.14
SLC1A1P43005 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC1A1P43005 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC1A1P43005 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SLC1A1P43005 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLC1A1P43005 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SLC1A1P43005 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC1A1P43005 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 AC023310.3-201ENST00000557027 670 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 AC100756.1-201ENST00000562736 682 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 AC138749.3-201ENST00000567691 622 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 BRI3BPP1-201ENST00000594224 787 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A1P43005 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 AC116165.1-201ENST00000611806 668 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 AC139530.3-201ENST00000620344 690 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 BX539320.1-201ENST00000623759 877 ntBASIC15.89■□□□□ 0.13
SLC1A1P43005 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC1A1P43005 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SLC1A1P43005 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A1P43005 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A1P43005 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 AP001267.2-201ENST00000532619 2086 ntBASIC15.88■□□□□ 0.13
SLC1A1P43005 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC1A1P43005 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A1P43005 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC1A1P43005 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A1P43005 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A1P43005 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC1A1P43005 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SLC1A1P43005 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC1A1P43005 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms