Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 MIR1908-201ENST00000410394 80 ntBASIC13.96□□□□□ -0.17
RFC3P40938 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 YBX1P6-201ENST00000442962 1002 ntBASIC13.96□□□□□ -0.17
RFC3P40938 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.96□□□□□ -0.17
RFC3P40938 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 ECM1P1-201ENST00000604092 1279 ntBASIC13.96□□□□□ -0.17
RFC3P40938 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.96□□□□□ -0.17
RFC3P40938 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.96□□□□□ -0.17
RFC3P40938 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFC3P40938 AL158070.2-201ENST00000623713 1621 ntBASIC13.96□□□□□ -0.17
RFC3P40938 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
RFC3P40938 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.96□□□□□ -0.18
RFC3P40938 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RFC3P40938 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
RFC3P40938 CICP11-201ENST00000434745 2827 ntBASIC13.96□□□□□ -0.18
RFC3P40938 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 LRRC59-203ENST00000576448 1531 ntBASIC13.95□□□□□ -0.18
RFC3P40938 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 AL138709.1-201ENST00000614840 1693 ntBASIC13.95□□□□□ -0.18
RFC3P40938 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RFC3P40938 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
RFC3P40938 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.95□□□□□ -0.18
RFC3P40938 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.95□□□□□ -0.18
RFC3P40938 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 ACTBP11-201ENST00000436287 1126 ntBASIC13.95□□□□□ -0.18
RFC3P40938 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 AL355994.2-201ENST00000447882 704 ntBASIC13.95□□□□□ -0.18
RFC3P40938 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 AC022494.1-201ENST00000466044 728 ntBASIC13.95□□□□□ -0.18
RFC3P40938 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.95□□□□□ -0.18
RFC3P40938 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.95□□□□□ -0.18
RFC3P40938 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.95□□□□□ -0.18
RFC3P40938 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 GPR182-203ENST00000622922 591 ntBASIC13.95□□□□□ -0.18
RFC3P40938 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 AC007787.1-201ENST00000588095 1583 ntBASIC13.95□□□□□ -0.18
RFC3P40938 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RFC3P40938 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms