Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
GDNFP39905 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.32□□□□□ -0.28
GDNFP39905 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDNFP39905 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GDNFP39905 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 AL627223.1-201ENST00000416693 442 ntBASIC13.31□□□□□ -0.28
GDNFP39905 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.31□□□□□ -0.28
GDNFP39905 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.31□□□□□ -0.28
GDNFP39905 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.31□□□□□ -0.28
GDNFP39905 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 AC084121.4-201ENST00000641598 221 ntBASIC13.31□□□□□ -0.28
GDNFP39905 AF228730.8-201ENST00000642140 221 ntBASIC13.31□□□□□ -0.28
GDNFP39905 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 AP3S2-216ENST00000617003 1561 ntBASIC13.31□□□□□ -0.28
GDNFP39905 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 AP000845.1-201ENST00000581677 2131 ntBASIC13.31□□□□□ -0.28
GDNFP39905 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GDNFP39905 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.31□□□□□ -0.28
GDNFP39905 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 TCAF1P1-201ENST00000414990 2232 ntBASIC13.31□□□□□ -0.28
GDNFP39905 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GDNFP39905 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
GDNFP39905 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GDNFP39905 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 FAM220BP-201ENST00000377689 816 ntBASIC13.3□□□□□ -0.28
GDNFP39905 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 KRT18P13-201ENST00000400056 1290 ntBASIC13.3□□□□□ -0.28
GDNFP39905 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms