Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM23P36406 Z93015.1-201ENST00000451718 390 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 PFN1P12-201ENST00000455938 534 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM23P36406 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 EEF1DP1-201ENST00000585891 896 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 AC073413.1-201ENST00000603927 732 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 ZACNP1-201ENST00000612259 710 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM23P36406 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 MIR4741-201ENST00000579822 90 ntBASIC14.9□□□□□ -0.02
TRIM23P36406 RN7SL219P-201ENST00000582872 296 ntBASIC14.9□□□□□ -0.02
TRIM23P36406 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM23P36406 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM23P36406 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM23P36406 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM23P36406 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM23P36406 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM23P36406 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRIM23P36406 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 AC073347.1-201ENST00000421633 2643 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms