Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.06■□□□□ 0.16
CHKAP35790 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.06■□□□□ 0.16
CHKAP35790 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
CHKAP35790 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.06■□□□□ 0.16
CHKAP35790 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKAP35790 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHKAP35790 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHKAP35790 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 AC079776.1-201ENST00000401540 1152 ntBASIC16.05■□□□□ 0.16
CHKAP35790 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.05■□□□□ 0.16
CHKAP35790 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 USP32P1-208ENST00000506594 1164 ntBASIC16.05■□□□□ 0.16
CHKAP35790 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 SLC25A47P1-201ENST00000531577 414 ntBASIC16.05■□□□□ 0.16
CHKAP35790 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.05■□□□□ 0.16
CHKAP35790 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.05■□□□□ 0.16
CHKAP35790 AP001063.1-201ENST00000568332 529 ntBASIC16.05■□□□□ 0.16
CHKAP35790 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.05■□□□□ 0.16
CHKAP35790 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.05■□□□□ 0.16
CHKAP35790 AL022328.1-201ENST00000610050 478 ntBASIC16.05■□□□□ 0.16
CHKAP35790 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHKAP35790 MIR6752-201ENST00000618442 71 ntBASIC16.05■□□□□ 0.16
CHKAP35790 RPSAP52-203ENST00000622976 1023 ntBASIC16.05■□□□□ 0.16
CHKAP35790 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
CHKAP35790 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHKAP35790 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 C8orf49-201ENST00000525043 1968 ntBASIC16.04■□□□□ 0.16
CHKAP35790 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHKAP35790 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 ACKR1-201ENST00000368121 1240 ntBASIC16.04■□□□□ 0.16
CHKAP35790 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHKAP35790 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms