Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 AC015936.2-201ENST00000593177 259 ntBASIC17.58■□□□□ 0.4
CDC27P30260 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CDC27P30260 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC27P30260 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.58■□□□□ 0.4
CDC27P30260 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDC27P30260 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC27P30260 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDC27P30260 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.58■□□□□ 0.4
CDC27P30260 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC27P30260 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDC27P30260 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDC27P30260 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CDC27P30260 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC27P30260 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 AC005229.1-201ENST00000392885 409 ntBASIC17.57■□□□□ 0.4
CDC27P30260 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.57■□□□□ 0.4
CDC27P30260 AC233724.13-201ENST00000598383 410 ntBASIC17.57■□□□□ 0.4
CDC27P30260 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDC27P30260 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC27P30260 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CDC27P30260 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC27P30260 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDC27P30260 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 GAPDHP21-201ENST00000450301 1010 ntBASIC17.56■□□□□ 0.4
CDC27P30260 FO681548.1-201ENST00000455617 1132 ntBASIC17.56■□□□□ 0.4
CDC27P30260 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 CR383656.12-201ENST00000549567 513 ntBASIC17.56■□□□□ 0.4
CDC27P30260 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.56■□□□□ 0.4
CDC27P30260 BTNL10-201ENST00000595971 695 ntBASIC17.56■□□□□ 0.4
CDC27P30260 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.56■□□□□ 0.4
CDC27P30260 AC244669.2-201ENST00000612320 853 ntBASIC17.56■□□□□ 0.4
CDC27P30260 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC27P30260 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC27P30260 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CDC27P30260 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDC27P30260 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 AC018665.1-201ENST00000622927 1362 ntBASIC17.55■□□□□ 0.4
CDC27P30260 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC27P30260 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC27P30260 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC27P30260 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC27P30260 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDC27P30260 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC27P30260 POM121L8P-201ENST00000417732 1281 ntBASIC17.55■□□□□ 0.4
CDC27P30260 POM121L9P-203ENST00000441984 1285 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms