Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A5P29400 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
COL4A5P29400 AC002472.4-201ENST00000641915 272 ntBASIC17.69■□□□□ 0.42
COL4A5P29400 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A5P29400 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.69■□□□□ 0.42
COL4A5P29400 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A5P29400 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
COL4A5P29400 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A5P29400 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
COL4A5P29400 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.69■□□□□ 0.42
COL4A5P29400 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.69■□□□□ 0.42
COL4A5P29400 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A5P29400 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A5P29400 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.69■□□□□ 0.42
COL4A5P29400 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL4A5P29400 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 PRAL-201ENST00000624952 3286 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 AC108734.2-201ENST00000420887 1069 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 OR8T1P-201ENST00000421347 918 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 KRT17P4-201ENST00000429445 819 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.68■□□□□ 0.42
COL4A5P29400 ST13P19-201ENST00000442505 1124 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A5P29400 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 AC068867.1-201ENST00000559855 150 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.68■□□□□ 0.42
COL4A5P29400 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COL4A5P29400 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.68■□□□□ 0.42
COL4A5P29400 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 SSR4P1-203ENST00000599569 2260 ntBASIC17.68■□□□□ 0.42
COL4A5P29400 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL4A5P29400 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
COL4A5P29400 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COL4A5P29400 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 BCAS2P2-201ENST00000425064 674 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 AQP7P5-201ENST00000428759 1049 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 AQP7P4-201ENST00000447083 1042 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 AQP7P2-201ENST00000453967 1041 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.67■□□□□ 0.42
COL4A5P29400 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 AC138701.2-201ENST00000553634 226 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.67■□□□□ 0.42
COL4A5P29400 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A5P29400 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 AQP7P3-201ENST00000624547 1041 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 AP002353.1-201ENST00000528257 1599 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COL4A5P29400 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 AC073869.2-201ENST00000417338 1026 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.67■□□□□ 0.42
COL4A5P29400 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
COL4A5P29400 AL451007.2-201ENST00000632004 563 ntBASIC17.67■□□□□ 0.42
COL4A5P29400 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.67■□□□□ 0.42
COL4A5P29400 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COL4A5P29400 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A5P29400 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms