Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 CICP11-201ENST00000434745 2827 ntBASIC20.45■□□□□ 0.86
ATF3P18847 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 AC112504.1-201ENST00000623415 1841 ntBASIC20.44■□□□□ 0.86
ATF3P18847 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.44■□□□□ 0.86
ATF3P18847 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC20.44■□□□□ 0.86
ATF3P18847 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ATF3P18847 HERC2P11-201ENST00000562845 725 ntBASIC20.44■□□□□ 0.86
ATF3P18847 AC100756.2-201ENST00000569537 736 ntBASIC20.44■□□□□ 0.86
ATF3P18847 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 ZBED1P1-201ENST00000502364 1930 ntBASIC20.44■□□□□ 0.86
ATF3P18847 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 AHCYP4-201ENST00000419201 1315 ntBASIC20.44■□□□□ 0.86
ATF3P18847 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.44■□□□□ 0.86
ATF3P18847 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATF3P18847 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATF3P18847 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.43■□□□□ 0.86
ATF3P18847 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.43■□□□□ 0.86
ATF3P18847 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.43■□□□□ 0.86
ATF3P18847 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ATF3P18847 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 AC022211.2-201ENST00000585075 2527 ntBASIC20.43■□□□□ 0.86
ATF3P18847 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ATF3P18847 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 GUSBP10-201ENST00000417412 665 ntBASIC20.43■□□□□ 0.86
ATF3P18847 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.43■□□□□ 0.86
ATF3P18847 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC20.43■□□□□ 0.86
ATF3P18847 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.43■□□□□ 0.86
ATF3P18847 AC055811.3-201ENST00000584952 686 ntBASIC20.43■□□□□ 0.86
ATF3P18847 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
ATF3P18847 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
ATF3P18847 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 AL359258.3-201ENST00000622910 2331 ntBASIC20.43■□□□□ 0.86
ATF3P18847 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 AC012508.2-201ENST00000567613 1472 ntBASIC20.43■□□□□ 0.86
ATF3P18847 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATF3P18847 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ATF3P18847 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.42■□□□□ 0.86
ATF3P18847 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
ATF3P18847 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.42■□□□□ 0.86
ATF3P18847 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ATF3P18847 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ATF3P18847 COX20P1-201ENST00000366529 357 ntBASIC20.42■□□□□ 0.86
ATF3P18847 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATF3P18847 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ATF3P18847 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.42■□□□□ 0.86
ATF3P18847 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATF3P18847 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.41■□□□□ 0.86
ATF3P18847 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms