Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.53■□□□□ 0.24
CCDC172P0C7W6 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.53■□□□□ 0.24
CCDC172P0C7W6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCDC172P0C7W6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC044860.1-202ENST00000559481 777 ntBASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AC092337.1-201ENST00000568699 1129 ntBASIC16.52■□□□□ 0.24
CCDC172P0C7W6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC172P0C7W6 AL691403.2-201ENST00000618460 490 ntBASIC16.52■□□□□ 0.24
CCDC172P0C7W6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC172P0C7W6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC114501.2-201ENST00000439631 535 ntBASIC16.51■□□□□ 0.23
CCDC172P0C7W6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC004066.1-201ENST00000502488 802 ntBASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC097493.3-201ENST00000509725 367 ntBASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 SAMD11P1-201ENST00000571429 661 ntBASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC172P0C7W6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms