Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
PDGFAP04085 AC092506.1-202ENST00000401022 528 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 AL591846.1-201ENST00000451736 433 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 AL590640.2-201ENST00000457038 527 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PDGFAP04085 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PDGFAP04085 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.3□□□□□ -0.12
PDGFAP04085 AC093813.1-201ENST00000605066 256 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 AC145423.3-201ENST00000615987 467 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.3□□□□□ -0.12
PDGFAP04085 AL008638.5-201ENST00000623814 1298 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PDGFAP04085 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 AL359183.1-201ENST00000623796 2132 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 AL138709.1-201ENST00000614840 1693 ntBASIC14.3□□□□□ -0.12
PDGFAP04085 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFAP04085 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PDGFAP04085 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.29□□□□□ -0.12
PDGFAP04085 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFAP04085 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.29□□□□□ -0.12
PDGFAP04085 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFAP04085 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFAP04085 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.29□□□□□ -0.12
PDGFAP04085 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDGFAP04085 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFAP04085 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms