Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PDCD6O75340 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.87□□□□□ -0.35
PDCD6O75340 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PDCD6O75340 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
PDCD6O75340 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.86□□□□□ -0.35
PDCD6O75340 TSEN15P1-201ENST00000423257 515 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 KLF2P3-201ENST00000451977 1087 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.86□□□□□ -0.35
PDCD6O75340 AC004967.1-201ENST00000453589 447 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 AC027369.6-201ENST00000525520 931 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 AC092865.5-201ENST00000545435 363 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
PDCD6O75340 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
PDCD6O75340 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 AL596442.2-201ENST00000610240 980 ntBASIC12.86□□□□□ -0.35
PDCD6O75340 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.86□□□□□ -0.35
PDCD6O75340 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PDCD6O75340 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PDCD6O75340 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
PDCD6O75340 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 AC097359.2-201ENST00000604992 2389 ntBASIC12.85□□□□□ -0.35
PDCD6O75340 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PDCD6O75340 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PDCD6O75340 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.85□□□□□ -0.35
PDCD6O75340 AC107890.1-201ENST00000422478 521 ntBASIC12.85□□□□□ -0.35
PDCD6O75340 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.85□□□□□ -0.35
PDCD6O75340 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.85□□□□□ -0.35
PDCD6O75340 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.85□□□□□ -0.35
PDCD6O75340 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms