Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 AC016694.1-201ENST00000434179 700 ntBASIC14.24□□□□□ -0.13
CTNSO60931 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.24□□□□□ -0.13
CTNSO60931 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.24□□□□□ -0.13
CTNSO60931 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.24□□□□□ -0.13
CTNSO60931 AC025279.2-201ENST00000569730 653 ntBASIC14.24□□□□□ -0.13
CTNSO60931 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CTNSO60931 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 AC055811.4-201ENST00000624039 1754 ntBASIC14.24□□□□□ -0.13
CTNSO60931 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTNSO60931 PCDHA3-202ENST00000532566 4594 ntBASIC14.24□□□□□ -0.13
CTNSO60931 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.24□□□□□ -0.13
CTNSO60931 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTNSO60931 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.23□□□□□ -0.13
CTNSO60931 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.23□□□□□ -0.13
CTNSO60931 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 C2orf27AP3-201ENST00000434123 579 ntBASIC14.23□□□□□ -0.13
CTNSO60931 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.23□□□□□ -0.13
CTNSO60931 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.23□□□□□ -0.13
CTNSO60931 RN7SL48P-201ENST00000579283 293 ntBASIC14.23□□□□□ -0.13
CTNSO60931 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.23□□□□□ -0.13
CTNSO60931 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTNSO60931 AL354718.3-201ENST00000616414 581 ntBASIC14.23□□□□□ -0.13
CTNSO60931 CR382287.1-201ENST00000623954 586 ntBASIC14.23□□□□□ -0.13
CTNSO60931 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CTNSO60931 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.23□□□□□ -0.13
CTNSO60931 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTNSO60931 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CTNSO60931 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.22□□□□□ -0.13
CTNSO60931 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTNSO60931 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTNSO60931 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTNSO60931 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.22□□□□□ -0.13
CTNSO60931 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTNSO60931 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms