Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.29□□□□□ -0.12
HCN1O60741 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 TOMM22P5-201ENST00000416399 439 ntBASIC14.29□□□□□ -0.12
HCN1O60741 AC136604.1-201ENST00000418535 575 ntBASIC14.29□□□□□ -0.12
HCN1O60741 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.29□□□□□ -0.12
HCN1O60741 ELK1P1-201ENST00000485699 580 ntBASIC14.29□□□□□ -0.12
HCN1O60741 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.29□□□□□ -0.12
HCN1O60741 WASH4P-201ENST00000564273 1246 ntBASIC14.29□□□□□ -0.12
HCN1O60741 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.29□□□□□ -0.12
HCN1O60741 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
HCN1O60741 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HCN1O60741 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.29□□□□□ -0.12
HCN1O60741 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
HCN1O60741 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HCN1O60741 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.28□□□□□ -0.12
HCN1O60741 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
HCN1O60741 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.28□□□□□ -0.12
HCN1O60741 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 INE1-201ENST00000456273 945 ntBASIC14.28□□□□□ -0.12
HCN1O60741 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 RN7SL399P-201ENST00000471648 279 ntBASIC14.28□□□□□ -0.12
HCN1O60741 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 GIMAP3P-201ENST00000495150 836 ntBASIC14.28□□□□□ -0.12
HCN1O60741 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 SLED1-202ENST00000512051 380 ntBASIC14.28□□□□□ -0.12
HCN1O60741 AC091951.1-201ENST00000512854 2465 ntBASIC14.28□□□□□ -0.12
HCN1O60741 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.28□□□□□ -0.12
HCN1O60741 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.28□□□□□ -0.12
HCN1O60741 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 AC097359.3-201ENST00000603982 1210 ntBASIC14.28□□□□□ -0.12
HCN1O60741 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HCN1O60741 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.28□□□□□ -0.12
HCN1O60741 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.28□□□□□ -0.12
HCN1O60741 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 AC067750.1-201ENST00000608826 6545 ntBASIC14.28□□□□□ -0.12
HCN1O60741 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HCN1O60741 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
HCN1O60741 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HCN1O60741 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
HCN1O60741 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 AC013726.1-201ENST00000563747 2285 ntBASIC14.27□□□□□ -0.12
HCN1O60741 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
HCN1O60741 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.27□□□□□ -0.12
HCN1O60741 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HCN1O60741 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
HCN1O60741 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.27□□□□□ -0.12
HCN1O60741 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms