Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK2O00526 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 TSSK5P-201ENST00000423978 907 ntBASIC12.22□□□□□ -0.45
UPK2O00526 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK2O00526 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 AC009477.1-201ENST00000452936 217 ntBASIC12.22□□□□□ -0.45
UPK2O00526 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK2O00526 AC093028.1-201ENST00000622998 982 ntBASIC12.22□□□□□ -0.45
UPK2O00526 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UPK2O00526 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.22□□□□□ -0.45
UPK2O00526 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UPK2O00526 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.22□□□□□ -0.45
UPK2O00526 CLK3P2-201ENST00000427566 1453 ntBASIC12.21□□□□□ -0.45
UPK2O00526 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
UPK2O00526 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UPK2O00526 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 AC009407.1-201ENST00000568958 598 ntBASIC12.21□□□□□ -0.45
UPK2O00526 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.21□□□□□ -0.45
UPK2O00526 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UPK2O00526 SRD5A3P1-201ENST00000603021 949 ntBASIC12.21□□□□□ -0.45
UPK2O00526 AL391069.4-201ENST00000609583 481 ntBASIC12.21□□□□□ -0.45
UPK2O00526 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
UPK2O00526 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UPK2O00526 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.21□□□□□ -0.45
UPK2O00526 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.21□□□□□ -0.45
UPK2O00526 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK2O00526 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UPK2O00526 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
UPK2O00526 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
UPK2O00526 AC015656.1-201ENST00000624209 3578 ntBASIC12.21□□□□□ -0.46
UPK2O00526 AL157414.3-201ENST00000624276 1954 ntBASIC12.21□□□□□ -0.46
UPK2O00526 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.21□□□□□ -0.46
UPK2O00526 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UPK2O00526 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
UPK2O00526 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK2O00526 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK2O00526 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.21□□□□□ -0.46
UPK2O00526 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK2O00526 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK2O00526 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
UPK2O00526 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.2□□□□□ -0.46
UPK2O00526 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK2O00526 AC139749.1-202ENST00000617529 3139 ntBASIC12.2□□□□□ -0.46
UPK2O00526 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms