Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 AC108073.2-201ENST00000464002 357 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 AL365330.1-201ENST00000607459 531 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 AC129492.6-201ENST00000611383 1305 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 AC004790.2-201ENST00000623588 572 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 AC117500.6-201ENST00000624871 588 ntBASIC13.26□□□□□ -0.29
HMX3A6NHT5 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMX3A6NHT5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
HMX3A6NHT5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.25□□□□□ -0.29
HMX3A6NHT5 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 MRPL20P1-201ENST00000400819 433 ntBASIC13.25□□□□□ -0.29
HMX3A6NHT5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 AP002469.2-201ENST00000531724 424 ntBASIC13.25□□□□□ -0.29
HMX3A6NHT5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 AC011467.4-201ENST00000594891 528 ntBASIC13.25□□□□□ -0.29
HMX3A6NHT5 AL773604.1-201ENST00000617417 272 ntBASIC13.25□□□□□ -0.29
HMX3A6NHT5 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.25□□□□□ -0.29
HMX3A6NHT5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMX3A6NHT5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms