Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AC018529.2-202ENST00000611482 3087 ntBASIC22.07■■□□□ 1.12
HFM1A2PYH4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AL136172.1-201ENST00000598590 1394 ntBASIC22.07■■□□□ 1.12
HFM1A2PYH4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 LINC00554-201ENST00000564841 3011 ntBASIC22.07■■□□□ 1.12
HFM1A2PYH4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 AC100827.2-201ENST00000563214 1194 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 MVK-217ENST00000639206 367 ntTSL 5 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 AC004899.1-201ENST00000424687 1714 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 FAM90A7P-201ENST00000382628 1395 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 FAM90A23P-201ENST00000400136 1395 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HFM1A2PYH4 HLA-J-204ENST00000495278 958 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 HIST2H2BC-201ENST00000498492 580 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 MARK2P5-201ENST00000507649 634 ntBASIC22.06■■□□□ 1.12
HFM1A2PYH4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC22.06■■□□□ 1.12
HFM1A2PYH4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 F10-203ENST00000409306 1450 ntTSL 3 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 KRT18P36-201ENST00000411618 1276 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 CALR4P-201ENST00000431943 946 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC006122.1-201ENST00000493323 440 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC138649.2-201ENST00000615886 705 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 MBLAC2-202ENST00000514906 1936 ntBASIC22.05■■□□□ 1.12
HFM1A2PYH4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC22.05■■□□□ 1.12
HFM1A2PYH4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
HFM1A2PYH4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms