Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC020658.7-201ENST00000624274 2442 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MIR600HG-201ENST00000449175 5984 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AL353705.2-201ENST00000428243 662 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC079140.1-201ENST00000508039 487 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SLC25A39P2-201ENST00000537614 270 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AC091812.2-201ENST00000619081 385 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AL691432.3-201ENST00000621860 400 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 AL157414.3-201ENST00000624276 1954 ntBASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.22□□□□□ -0.13
TCRBV3S1A0A5B6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 KRT8P48-201ENST00000515599 1220 ntBASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 IGHV3-62-201ENST00000520057 340 ntBASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC145285.3-201ENST00000564603 959 ntBASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 AC092865.6-201ENST00000642101 219 ntBASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TCRBV3S1A0A5B6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms