Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SLC4A7Q9Y6M7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ME2P1-201ENST00000426028 1970 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 DPM3-202ENST00000368399 517 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ACTG1P2-201ENST00000415776 1125 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ACTG1P11-201ENST00000425411 1125 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AC100850.1-201ENST00000506768 649 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AL161670.2-201ENST00000557650 1227 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AC026740.1-201ENST00000607068 791 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AP003419.4-201ENST00000616071 517 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AL662844.4-201ENST00000606367 2838 ntBASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC4A7Q9Y6M7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AL645937.2-201ENST00000396808 931 ntBASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AC013355.1-201ENST00000562625 723 ntBASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 MIR3147-201ENST00000577811 66 ntBASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC4A7Q9Y6M7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms