Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 MIR4469-201ENST00000583919 79 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01115-203ENST00000606068 577 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AC074044.1-201ENST00000609673 707 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AP001059.3-201ENST00000619053 235 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 AC126335.2-201ENST00000623362 4637 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE2Q9NRR3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 BEND3P1-201ENST00000421591 1944 ntBASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AC152010.1-201ENST00000415779 2006 ntBASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 TPT1P11-201ENST00000458482 498 ntBASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE2Q9NRR3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms