Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 MESTP3-201ENST00000503460 968 ntBASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 AC044849.1-201ENST00000519737 1188 ntBASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 CICP23-201ENST00000605013 2741 ntBASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
KIAA1549Q9HCM3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 IGHJ2P-201ENST00000454480 60 ntBASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AP001002.3-201ENST00000623482 206 ntBASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AC020910.5-201ENST00000623668 1865 ntBASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
KIAA1549Q9HCM3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 CALR4P-201ENST00000431943 946 ntBASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 AC091271.1-201ENST00000611877 1162 ntBASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms