Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRRC40Q9H9A6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 MIR770-201ENST00000390219 98 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 NUS1P3-201ENST00000423502 862 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 AC134915.1-201ENST00000426461 574 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 DFFBP1-201ENST00000433250 979 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 UGT1A2P-201ENST00000454886 866 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 AC093726.1-201ENST00000608064 963 ntBASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRRC40Q9H9A6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LRRC40Q9H9A6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC007191.1-201ENST00000623179 2995 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC140479.7-201ENST00000636301 2332 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AL442647.2-201ENST00000429864 857 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 HLA-K-203ENST00000430151 1046 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC120045.2-201ENST00000567334 178 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms