Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-3Q9BYR6 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC01514-201ENST00000434189 1338 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-3Q9BYR6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 MARVELD2-202ENST00000413223 1584 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 STARD6-203ENST00000581310 1371 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC067945.1-201ENST00000342609 618 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 APOM-202ENST00000375918 922 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 NXNP1-201ENST00000397383 1051 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 TPT1P2-201ENST00000413105 503 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC112492.5-201ENST00000421897 457 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC233279.1-201ENST00000455300 423 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AL356390.1-201ENST00000455684 397 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AL117348.1-201ENST00000513672 342 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 NEMF-210ENST00000556672 590 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC027281.1-201ENST00000574178 758 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC124283.1-201ENST00000576912 1190 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC015871.2-201ENST00000603605 948 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 GPC5-204ENST00000618596 960 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC010928.1-201ENST00000592477 1447 ntBASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-3Q9BYR6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP3-3Q9BYR6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms