Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 ANKRD19P-201ENST00000338192 862 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 IGLL3P-201ENST00000412472 434 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AC108751.1-201ENST00000490852 363 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AC098859.1-201ENST00000502915 1238 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 AC061975.2-201ENST00000581722 295 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SSBP4Q9BWG4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 FAM197Y8-203ENST00000450145 560 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AF186996.4-201ENST00000467186 377 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 KRT18P35-201ENST00000510488 1269 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC073389.1-201ENST00000595595 795 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC007064.4-201ENST00000637740 555 ntBASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
SSBP4Q9BWG4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms