Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC074051.2-201ENST00000565115 352 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC092329.2-201ENST00000598402 547 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AL078644.1-201ENST00000609881 752 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC092119.3-201ENST00000612618 583 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC093458.2-201ENST00000623150 629 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 AC106795.1-205ENST00000512851 1056 ntBASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB3IPQ96QF0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 STRCP1-201ENST00000509801 5328 ntBASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 AC019294.4-201ENST00000561777 2905 ntBASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IPQ96QF0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms