Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 LINC02560-201ENST00000596379 459 ntBASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 AC008761.3-201ENST00000624803 892 ntBASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 KRT8P22-201ENST00000562317 1415 ntBASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 REXO1L5P-201ENST00000622260 2098 ntBASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MS4A4EQ96PG1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 AP001582.1-201ENST00000525856 295 ntBASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 TMEM261P1-201ENST00000604899 340 ntBASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MS4A4EQ96PG1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AL137783.1-201ENST00000623494 1896 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 KRT8P14-201ENST00000414254 1442 ntBASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MS4A4EQ96PG1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms