Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC002472.2-201ENST00000442739 958 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 SPTLC1P1-201ENST00000447199 261 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 RN7SL204P-201ENST00000582831 262 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 LINC02560-201ENST00000596379 459 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC092364.2-202ENST00000597012 1073 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC004233.3-201ENST00000607794 1269 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC008761.3-201ENST00000624803 892 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 AC236430.1-201ENST00000402231 743 ntBASIC14.44□□□□□ -0.1
COL21A1Q96P44 MEP1AP4-201ENST00000423244 1087 ntBASIC14.44□□□□□ -0.1
COL21A1Q96P44 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 AL589987.1-201ENST00000453380 819 ntBASIC14.44□□□□□ -0.1
COL21A1Q96P44 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 TPRX2P-201ENST00000535362 881 ntBASIC14.44□□□□□ -0.1
COL21A1Q96P44 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL21A1Q96P44 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COL21A1Q96P44 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 MIR661-201ENST00000384842 89 ntBASIC14.43□□□□□ -0.1
COL21A1Q96P44 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 GNAQP1-201ENST00000444815 1067 ntBASIC14.43□□□□□ -0.1
COL21A1Q96P44 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 KRT18P43-201ENST00000469825 1281 ntBASIC14.43□□□□□ -0.1
COL21A1Q96P44 AC093004.1-201ENST00000508850 424 ntBASIC14.43□□□□□ -0.1
COL21A1Q96P44 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms