Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.85■□□□□ 0.45
STAG1Q8WVM7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.85■□□□□ 0.45
STAG1Q8WVM7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 RNA5SP412-201ENST00000516234 123 ntBASIC17.84■□□□□ 0.45
STAG1Q8WVM7 AC079316.1-201ENST00000548397 411 ntBASIC17.84■□□□□ 0.45
STAG1Q8WVM7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.84■□□□□ 0.45
STAG1Q8WVM7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 REXO1L6P-201ENST00000603433 1515 ntBASIC17.83■□□□□ 0.45
STAG1Q8WVM7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
STAG1Q8WVM7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC026954.1-201ENST00000429771 1293 ntBASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AC138466.3-201ENST00000619983 221 ntBASIC17.83■□□□□ 0.44
STAG1Q8WVM7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
STAG1Q8WVM7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
STAG1Q8WVM7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms