Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 REXO1L2P-201ENST00000425429 2069 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 MBLAC2-202ENST00000514906 1936 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC092135.3-201ENST00000624151 1846 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC022145.2-201ENST00000598203 171 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AL671883.3-201ENST00000603274 991 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC105339.1-204ENST00000636249 355 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AL928921.2-201ENST00000641325 2442 ntBASIC13.25□□□□□ -0.29
CCDC107Q8WV48 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
CCDC107Q8WV48 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 KRT18P32-201ENST00000424695 1287 ntBASIC13.24□□□□□ -0.29
CCDC107Q8WV48 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 MIR4469-201ENST00000583919 79 ntBASIC13.24□□□□□ -0.29
CCDC107Q8WV48 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms