Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AL139094.1-201ENST00000405549 1188 ntBASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 SOCS2P1-201ENST00000417727 557 ntBASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 AC067930.6-201ENST00000623257 4947 ntBASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH19Q8TAB3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 RNU1-114P-201ENST00000365297 166 ntBASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AC098614.1-201ENST00000368528 745 ntBASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AP006294.1-201ENST00000415407 339 ntBASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AC133539.2-201ENST00000604757 467 ntBASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AC005252.2-201ENST00000624630 1141 ntBASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDH19Q8TAB3 KRT8P14-201ENST00000414254 1442 ntBASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 DUX4L47-201ENST00000566374 394 ntBASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 WFDC1-204ENST00000613603 549 ntBASIC15.68■□□□□ 0.1
PCDH19Q8TAB3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms