Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 AC009093.7-201ENST00000623853 1223 ntBASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.74□□□□□ -0.21
BBS1Q8NFJ9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 CETN4P-206ENST00000642099 2168 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 RPL37AP1-201ENST00000412502 279 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 KRT18P43-201ENST00000469825 1281 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 YBX1P5-201ENST00000509441 847 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AL645728.2-202ENST00000641679 227 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 AC010327.5-201ENST00000586923 3061 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
BBS1Q8NFJ9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AL022342.1-201ENST00000400363 863 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 SERBP1P3-201ENST00000459980 809 ntBASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.72□□□□□ -0.21
BBS1Q8NFJ9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms