Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PHTF2Q8N3S3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 KLF2P2-201ENST00000416807 1039 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 AC090142.2-201ENST00000483263 416 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 FAM86HP-204ENST00000513466 959 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 RN7SL560P-201ENST00000577943 264 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 KRT8P44-201ENST00000441609 1350 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 AC020907.1-201ENST00000616460 1350 ntBASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PHTF2Q8N3S3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 AC090616.6-203ENST00000579186 1945 ntBASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 AL590640.2-201ENST00000457038 527 ntBASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 ZNF767P-206ENST00000513792 565 ntBASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 AC138951.2-201ENST00000623455 1161 ntBASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PHTF2Q8N3S3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms