Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 RNU1-114P-201ENST00000365297 166 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 Z97180.1-201ENST00000445173 988 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 IGLV3-15-201ENST00000518356 244 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AP005019.2-201ENST00000615104 511 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AC006480.2-201ENST00000609770 1337 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AP001582.1-201ENST00000525856 295 ntBASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.8□□□□□ -0.2
RP1L1Q8IWN7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AD000864.1-201ENST00000624076 2295 ntBASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AL008707.1-201ENST00000422498 534 ntBASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 AL451050.2-201ENST00000606967 682 ntBASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RP1L1Q8IWN7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms