Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP1-3Q8IUG1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP1-3Q8IUG1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 FAM86B3P-203ENST00000523992 854 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 HERC2P11-201ENST00000562845 725 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC100756.2-201ENST00000569537 736 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 MIR2392-201ENST00000584881 84 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC055811.3-201ENST00000584952 686 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 AP000845.1-201ENST00000581677 2131 ntBASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP1-3Q8IUG1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 RPL35P9-201ENST00000446059 350 ntBASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 AC027139.1-201ENST00000565286 951 ntBASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 AC007250.1-201ENST00000608934 338 ntBASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 AC006213.4-201ENST00000616184 634 ntBASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP1-3Q8IUG1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
KRTAP1-3Q8IUG1 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.15□□□□□ -0.47
KRTAP1-3Q8IUG1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
KRTAP1-3Q8IUG1 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
KRTAP1-3Q8IUG1 AL590440.2-201ENST00000641973 1595 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms