Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ZNF546Q86UE3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF546Q86UE3 AC016397.2-201ENST00000624848 1985 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AC073548.1-201ENST00000624088 1882 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MRPL20P1-201ENST00000400819 433 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 KRT18P34-201ENST00000488218 1270 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 AL358472.4-201ENST00000633140 710 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 KRT8P22-201ENST00000562317 1415 ntBASIC12.7□□□□□ -0.38
ZNF546Q86UE3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF546Q86UE3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 AC020658.7-201ENST00000624274 2442 ntBASIC12.69□□□□□ -0.38
ZNF546Q86UE3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.69□□□□□ -0.38
ZNF546Q86UE3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 KRT18P27-201ENST00000427733 1299 ntBASIC12.69□□□□□ -0.38
ZNF546Q86UE3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 KRT18P31-201ENST00000506277 1292 ntBASIC12.69□□□□□ -0.38
ZNF546Q86UE3 IGHV3-65-201ENST00000523210 341 ntBASIC12.69□□□□□ -0.38
ZNF546Q86UE3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF546Q86UE3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms