Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 AC025279.2-201ENST00000569730 653 ntBASIC16.2■□□□□ 0.18
VSTM1Q6UX27 MIR4259-201ENST00000584466 101 ntBASIC16.2■□□□□ 0.18
VSTM1Q6UX27 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.2■□□□□ 0.18
VSTM1Q6UX27 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSTM1Q6UX27 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AL158070.2-201ENST00000623713 1621 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AC232323.1-201ENST00000540724 2099 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 REXO1L5P-201ENST00000622260 2098 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 RPS2P32-201ENST00000439199 892 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 FO681548.1-201ENST00000455617 1132 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 KRT90P-201ENST00000549264 1064 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AC145423.3-201ENST00000615987 467 ntBASIC16.19■□□□□ 0.18
VSTM1Q6UX27 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.19■□□□□ 0.18
VSTM1Q6UX27 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.18■□□□□ 0.18
VSTM1Q6UX27 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AC079316.1-201ENST00000548397 411 ntBASIC16.18■□□□□ 0.18
VSTM1Q6UX27 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AC132938.4-201ENST00000623835 848 ntBASIC16.18■□□□□ 0.18
VSTM1Q6UX27 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 KRT8P14-201ENST00000414254 1442 ntBASIC16.18■□□□□ 0.18
VSTM1Q6UX27 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 AL138709.1-201ENST00000614840 1693 ntBASIC16.18■□□□□ 0.18
VSTM1Q6UX27 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VSTM1Q6UX27 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VSTM1Q6UX27 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VSTM1Q6UX27 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VSTM1Q6UX27 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms