Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AL158211.3-201ENST00000607385 239 ntBASIC14.22□□□□□ -0.13
REEP3Q6NUK4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 AC092580.3-201ENST00000430932 139 ntBASIC14.21□□□□□ -0.13
REEP3Q6NUK4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 MEIS3P1-201ENST00000495167 958 ntBASIC14.21□□□□□ -0.13
REEP3Q6NUK4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 AC100757.3-201ENST00000622361 1406 ntBASIC14.21□□□□□ -0.13
REEP3Q6NUK4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
REEP3Q6NUK4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
REEP3Q6NUK4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 KRT18P13-201ENST00000400056 1290 ntBASIC14.2□□□□□ -0.14
REEP3Q6NUK4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AC097493.3-201ENST00000509725 367 ntBASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AL590560.3-201ENST00000623350 461 ntBASIC14.2□□□□□ -0.14
REEP3Q6NUK4 AL158212.4-201ENST00000624062 1286 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms