Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ACTG1P3-201ENST00000431775 1114 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16■□□□□ 0.15
RNF43Q68DV7 AL583810.1-201ENST00000553344 1045 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16■□□□□ 0.15
RNF43Q68DV7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16■□□□□ 0.15
RNF43Q68DV7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 MIR5189-201ENST00000577370 114 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 AC103810.3-201ENST00000583567 96 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16■□□□□ 0.15
RNF43Q68DV7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16■□□□□ 0.15
RNF43Q68DV7 AC010319.3-201ENST00000597028 470 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16■□□□□ 0.15
RNF43Q68DV7 MROH4P-201ENST00000431302 1578 ntBASIC16■□□□□ 0.15
RNF43Q68DV7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF43Q68DV7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF43Q68DV7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF43Q68DV7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 SOCS2P1-201ENST00000417727 557 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 AL355994.2-201ENST00000447882 704 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 KLF2P4-201ENST00000451959 1225 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 CTBP2P5-201ENST00000454986 1264 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CLUHP6-201ENST00000580789 941 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 AC244093.1-201ENST00000610837 814 ntBASIC15.98■□□□□ 0.15
RNF43Q68DV7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms