Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SPDYE17-201ENST00000412399 783 ntBASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AC010327.4-202ENST00000591484 748 ntBASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AL589739.1-201ENST00000607720 493 ntBASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AC007967.4-201ENST00000614700 386 ntBASIC13.55□□□□□ -0.24
ODF4Q2M2E3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.55□□□□□ -0.24
ODF4Q2M2E3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ODF4Q2M2E3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 AC074338.1-201ENST00000416825 156 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 FAM8A3P-201ENST00000427218 844 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 DNAJB3-201ENST00000446806 729 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 SLED1-202ENST00000512051 380 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 AL079307.3-201ENST00000556114 283 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 AL671883.3-201ENST00000603274 991 ntBASIC13.54□□□□□ -0.24
ODF4Q2M2E3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ODF4Q2M2E3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.53□□□□□ -0.24
ODF4Q2M2E3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms