Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL10A1Q03692 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
COL10A1Q03692 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
COL10A1Q03692 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL10A1Q03692 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL10A1Q03692 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.91□□□□□ -0.34
COL10A1Q03692 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COL10A1Q03692 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.91□□□□□ -0.34
COL10A1Q03692 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.91□□□□□ -0.34
COL10A1Q03692 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL10A1Q03692 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL10A1Q03692 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.91□□□□□ -0.34
COL10A1Q03692 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.9□□□□□ -0.34
COL10A1Q03692 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
COL10A1Q03692 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 MEP1AP4-201ENST00000423244 1087 ntBASIC12.9□□□□□ -0.34
COL10A1Q03692 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 RN7SL399P-201ENST00000471648 279 ntBASIC12.9□□□□□ -0.34
COL10A1Q03692 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.9□□□□□ -0.34
COL10A1Q03692 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 AP000845.1-201ENST00000581677 2131 ntBASIC12.9□□□□□ -0.34
COL10A1Q03692 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.9□□□□□ -0.34
COL10A1Q03692 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COL10A1Q03692 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.9□□□□□ -0.34
COL10A1Q03692 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.9□□□□□ -0.34
COL10A1Q03692 AC012508.2-201ENST00000567613 1472 ntBASIC12.9□□□□□ -0.34
COL10A1Q03692 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL10A1Q03692 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
COL10A1Q03692 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
COL10A1Q03692 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
COL10A1Q03692 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
COL10A1Q03692 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
COL10A1Q03692 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.89□□□□□ -0.35
COL10A1Q03692 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.89□□□□□ -0.35
COL10A1Q03692 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
COL10A1Q03692 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
COL10A1Q03692 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL10A1Q03692 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.89□□□□□ -0.35
COL10A1Q03692 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.89□□□□□ -0.35
COL10A1Q03692 TSPY16P-201ENST00000449843 468 ntBASIC12.89□□□□□ -0.35
COL10A1Q03692 AC004066.1-201ENST00000502488 802 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms