Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH11P55287 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH11P55287 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH11P55287 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
CDH11P55287 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH11P55287 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH11P55287 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CDH11P55287 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH11P55287 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH11P55287 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH11P55287 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 AZGP1P1-201ENST00000411909 902 ntBASIC14.02□□□□□ -0.17
CDH11P55287 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH11P55287 TSSK5P-201ENST00000423978 907 ntBASIC14.02□□□□□ -0.17
CDH11P55287 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH11P55287 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH11P55287 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.02□□□□□ -0.17
CDH11P55287 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH11P55287 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CDH11P55287 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDH11P55287 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDH11P55287 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
CDH11P55287 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH11P55287 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH11P55287 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 REXO1L2P-201ENST00000425429 2069 ntBASIC14.02□□□□□ -0.17
CDH11P55287 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH11P55287 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH11P55287 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.01□□□□□ -0.17
CDH11P55287 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH11P55287 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH11P55287 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH11P55287 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 BANF1P1-201ENST00000553684 263 ntBASIC14.01□□□□□ -0.17
CDH11P55287 AC004233.3-201ENST00000607794 1269 ntBASIC14.01□□□□□ -0.17
CDH11P55287 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 CICP4-201ENST00000447359 2812 ntBASIC14.01□□□□□ -0.17
CDH11P55287 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDH11P55287 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH11P55287 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH11P55287 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH11P55287 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms