Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC004967.1-201ENST00000453589 447 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ATP1B3P54709 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 HLA-J-203ENST00000494367 1087 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.28□□□□□ -0.28
ATP1B3P54709 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.28□□□□□ -0.28
ATP1B3P54709 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.28□□□□□ -0.28
ATP1B3P54709 AC011467.4-201ENST00000594891 528 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 AL136317.3-201ENST00000618497 906 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 AC079781.4-201ENST00000641908 219 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.28□□□□□ -0.28
ATP1B3P54709 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.28□□□□□ -0.28
ATP1B3P54709 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATP1B3P54709 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATP1B3P54709 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ATP1B3P54709 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.27□□□□□ -0.28
ATP1B3P54709 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ATP1B3P54709 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.27□□□□□ -0.28
ATP1B3P54709 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ATP1B3P54709 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATP1B3P54709 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ATP1B3P54709 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 KRT18P43-201ENST00000469825 1281 ntBASIC13.27□□□□□ -0.29
ATP1B3P54709 SDHAP3-202ENST00000515467 728 ntBASIC13.27□□□□□ -0.29
ATP1B3P54709 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.27□□□□□ -0.29
ATP1B3P54709 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 AC025678.2-201ENST00000562061 970 ntBASIC13.27□□□□□ -0.29
ATP1B3P54709 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 AC074044.1-201ENST00000609673 707 ntBASIC13.27□□□□□ -0.29
ATP1B3P54709 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 AC107918.4-201ENST00000641966 3141 ntBASIC13.27□□□□□ -0.29
ATP1B3P54709 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.27□□□□□ -0.29
ATP1B3P54709 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATP1B3P54709 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.27□□□□□ -0.29
ATP1B3P54709 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ATP1B3P54709 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ATP1B3P54709 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.26□□□□□ -0.29
ATP1B3P54709 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ATP1B3P54709 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms