Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 RN7SKP230-201ENST00000365642 335 ntBASIC15.17■□□□□ 0.02
CSNK1DP48730 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.17■□□□□ 0.02
CSNK1DP48730 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 AL391280.1-201ENST00000506969 1062 ntBASIC15.17■□□□□ 0.02
CSNK1DP48730 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.17■□□□□ 0.02
CSNK1DP48730 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.17■□□□□ 0.02
CSNK1DP48730 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.17■□□□□ 0.02
CSNK1DP48730 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSNK1DP48730 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
CSNK1DP48730 LINC00528-201ENST00000600723 2160 ntBASIC15.17■□□□□ 0.02
CSNK1DP48730 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CSNK1DP48730 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.16■□□□□ 0.02
CSNK1DP48730 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 YBX1P6-201ENST00000442962 1002 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 COX5BP1-201ENST00000507622 393 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 AP003171.2-201ENST00000528208 925 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 OR10B1P-201ENST00000601666 907 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 AL008721.1-201ENST00000609964 604 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 ZACNP1-201ENST00000612259 710 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 TSPY26P-202ENST00000565928 3884 ntBASIC15.16■□□□□ 0.02
CSNK1DP48730 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1DP48730 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1DP48730 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1DP48730 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 RN7SKP175-201ENST00000408472 289 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms