Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX5P48382 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX5P48382 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.46■□□□□ 0.55
RFX5P48382 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX5P48382 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX5P48382 SHC1P1-201ENST00000425230 1745 ntBASIC18.46■□□□□ 0.55
RFX5P48382 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
RFX5P48382 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 AC018442.1-201ENST00000421439 2061 ntBASIC18.45■□□□□ 0.54
RFX5P48382 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RFX5P48382 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 MIR1247-201ENST00000408206 136 ntBASIC18.45■□□□□ 0.54
RFX5P48382 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.45■□□□□ 0.54
RFX5P48382 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.45■□□□□ 0.54
RFX5P48382 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.45■□□□□ 0.54
RFX5P48382 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RFX5P48382 AC022748.3-201ENST00000621828 275 ntBASIC18.45■□□□□ 0.54
RFX5P48382 AL162426.1-201ENST00000624141 743 ntBASIC18.45■□□□□ 0.54
RFX5P48382 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.45■□□□□ 0.54
RFX5P48382 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.45■□□□□ 0.54
RFX5P48382 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RFX5P48382 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RFX5P48382 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 AC020907.1-201ENST00000616460 1350 ntBASIC18.44■□□□□ 0.54
RFX5P48382 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RFX5P48382 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 POM121L10P-201ENST00000436994 1285 ntBASIC18.44■□□□□ 0.54
RFX5P48382 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.44■□□□□ 0.54
RFX5P48382 AC022494.1-201ENST00000466044 728 ntBASIC18.44■□□□□ 0.54
RFX5P48382 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RFX5P48382 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.44■□□□□ 0.54
RFX5P48382 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 MIR6787-201ENST00000616675 61 ntBASIC18.44■□□□□ 0.54
RFX5P48382 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RFX5P48382 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX5P48382 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX5P48382 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RFX5P48382 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFX5P48382 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFX5P48382 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFX5P48382 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.43■□□□□ 0.54
RFX5P48382 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RFX5P48382 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFX5P48382 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFX5P48382 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RFX5P48382 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.43■□□□□ 0.54
RFX5P48382 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX5P48382 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.43■□□□□ 0.54
RFX5P48382 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.43■□□□□ 0.54
RFX5P48382 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.43■□□□□ 0.54
RFX5P48382 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms