Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 AL627231.1-201ENST00000394467 1125 ntBASIC16.32■□□□□ 0.2
RFC2P35250 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC2P35250 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 AC078875.1-201ENST00000431907 724 ntBASIC16.32■□□□□ 0.2
RFC2P35250 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFC2P35250 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC2P35250 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.32■□□□□ 0.2
RFC2P35250 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC2P35250 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.32■□□□□ 0.2
RFC2P35250 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RFC2P35250 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
RFC2P35250 AC009093.2-202ENST00000620513 2079 ntBASIC16.32■□□□□ 0.2
RFC2P35250 HLA-C-210ENST00000640219 976 ntBASIC16.32■□□□□ 0.2
RFC2P35250 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC2P35250 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 INE2-201ENST00000630399 1874 ntBASIC16.31■□□□□ 0.2
RFC2P35250 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 FAM90A2P-201ENST00000511144 1395 ntBASIC16.31■□□□□ 0.2
RFC2P35250 FAM90A25P-201ENST00000528404 1395 ntBASIC16.31■□□□□ 0.2
RFC2P35250 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RFC2P35250 AL138725.1-201ENST00000407347 1314 ntBASIC16.31■□□□□ 0.2
RFC2P35250 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.31■□□□□ 0.2
RFC2P35250 AC114501.1-201ENST00000445949 172 ntBASIC16.31■□□□□ 0.2
RFC2P35250 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RFC2P35250 AL031713.1-201ENST00000564813 661 ntBASIC16.31■□□□□ 0.2
RFC2P35250 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFC2P35250 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RFC2P35250 MBLAC2-202ENST00000514906 1936 ntBASIC16.31■□□□□ 0.2
RFC2P35250 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC2P35250 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RFC2P35250 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFC2P35250 AC079328.2-201ENST00000561241 3354 ntBASIC16.3■□□□□ 0.2
RFC2P35250 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFC2P35250 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.3■□□□□ 0.2
RFC2P35250 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RFC2P35250 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFC2P35250 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.3■□□□□ 0.2
RFC2P35250 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFC2P35250 RN7SKP230-201ENST00000365642 335 ntBASIC16.3■□□□□ 0.2
RFC2P35250 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFC2P35250 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC2P35250 AC078991.1-201ENST00000437297 610 ntBASIC16.3■□□□□ 0.2
RFC2P35250 KLF2P1-201ENST00000447438 1042 ntBASIC16.3■□□□□ 0.2
RFC2P35250 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.3■□□□□ 0.2
RFC2P35250 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.3■□□□□ 0.2
RFC2P35250 SCARNA21-201ENST00000517026 139 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 418.1 ms