Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 LINC00528-201ENST00000600723 2160 ntBASIC14.54□□□□□ -0.08
GPC1P35052 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 TSSK5P-201ENST00000423978 907 ntBASIC14.54□□□□□ -0.08
GPC1P35052 FAM8A3P-201ENST00000427218 844 ntBASIC14.54□□□□□ -0.08
GPC1P35052 AC114501.2-201ENST00000439631 535 ntBASIC14.54□□□□□ -0.08
GPC1P35052 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC1P35052 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.54□□□□□ -0.08
GPC1P35052 AC135586.1-201ENST00000539323 574 ntBASIC14.54□□□□□ -0.08
GPC1P35052 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 GPALPP1-207ENST00000611650 899 ntBASIC14.54□□□□□ -0.08
GPC1P35052 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC1P35052 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.54□□□□□ -0.08
GPC1P35052 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GPC1P35052 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC1P35052 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
GPC1P35052 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC1P35052 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 AC022144.1-201ENST00000602255 1580 ntBASIC14.53□□□□□ -0.08
GPC1P35052 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
GPC1P35052 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.53□□□□□ -0.08
GPC1P35052 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.53□□□□□ -0.08
GPC1P35052 BASP1P1-201ENST00000430708 665 ntBASIC14.53□□□□□ -0.08
GPC1P35052 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 AC009477.1-201ENST00000452936 217 ntBASIC14.53□□□□□ -0.08
GPC1P35052 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.53□□□□□ -0.08
GPC1P35052 MEIS3P1-201ENST00000495167 958 ntBASIC14.53□□□□□ -0.08
GPC1P35052 AC093214.1-201ENST00000511688 1107 ntBASIC14.53□□□□□ -0.08
GPC1P35052 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
GPC1P35052 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.53□□□□□ -0.08
GPC1P35052 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.53□□□□□ -0.08
GPC1P35052 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.53□□□□□ -0.08
GPC1P35052 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.53□□□□□ -0.08
GPC1P35052 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.53□□□□□ -0.08
GPC1P35052 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GPC1P35052 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GPC1P35052 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms