Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.45□□□□□ -0.1
PTPN6P29350 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.45□□□□□ -0.1
PTPN6P29350 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PTPN6P29350 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 SAMD11P1-201ENST00000571429 661 ntBASIC14.45□□□□□ -0.1
PTPN6P29350 SRD5A3P1-201ENST00000603021 949 ntBASIC14.45□□□□□ -0.1
PTPN6P29350 AC004233.3-201ENST00000607794 1269 ntBASIC14.45□□□□□ -0.1
PTPN6P29350 AC004790.1-201ENST00000612686 536 ntBASIC14.45□□□□□ -0.1
PTPN6P29350 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.45□□□□□ -0.1
PTPN6P29350 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
PTPN6P29350 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PTPN6P29350 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PTPN6P29350 AL360270.3-201ENST00000609118 1348 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 AL035633.1-201ENST00000406139 838 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 GAPDHP40-201ENST00000505218 1006 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 DOC2GP-202ENST00000514950 1163 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN6P29350 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.44□□□□□ -0.1
PTPN6P29350 AC092337.1-201ENST00000568699 1129 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 AC041040.2-201ENST00000622926 2899 ntBASIC14.44□□□□□ -0.1
PTPN6P29350 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms