Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.63□□□□□ -0.07
HTR1EP28566 GIMAP3P-201ENST00000495150 836 ntBASIC14.63□□□□□ -0.07
HTR1EP28566 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.63□□□□□ -0.07
HTR1EP28566 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.63□□□□□ -0.07
HTR1EP28566 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
HTR1EP28566 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.63□□□□□ -0.07
HTR1EP28566 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 AC018529.2-202ENST00000611482 3087 ntBASIC14.63□□□□□ -0.07
HTR1EP28566 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.63□□□□□ -0.07
HTR1EP28566 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HTR1EP28566 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HTR1EP28566 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.63□□□□□ -0.07
HTR1EP28566 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HTR1EP28566 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 AC097359.2-201ENST00000604992 2389 ntBASIC14.62□□□□□ -0.07
HTR1EP28566 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.62□□□□□ -0.07
HTR1EP28566 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HTR1EP28566 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.62□□□□□ -0.07
HTR1EP28566 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.62□□□□□ -0.07
HTR1EP28566 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.62□□□□□ -0.07
HTR1EP28566 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HTR1EP28566 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 AC018442.1-201ENST00000421439 2061 ntBASIC14.62□□□□□ -0.07
HTR1EP28566 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HTR1EP28566 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.62□□□□□ -0.07
HTR1EP28566 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.62□□□□□ -0.07
HTR1EP28566 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HTR1EP28566 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HTR1EP28566 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
HTR1EP28566 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.61□□□□□ -0.07
HTR1EP28566 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HTR1EP28566 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.61□□□□□ -0.07
HTR1EP28566 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.61□□□□□ -0.07
HTR1EP28566 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 AC009477.1-201ENST00000452936 217 ntBASIC14.61□□□□□ -0.07
HTR1EP28566 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.61□□□□□ -0.07
HTR1EP28566 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.61□□□□□ -0.07
HTR1EP28566 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HTR1EP28566 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms