Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 AL359258.3-201ENST00000622910 2331 ntBASIC14.63□□□□□ -0.07
PTX3P26022 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 AL442647.2-201ENST00000429864 857 ntBASIC14.63□□□□□ -0.07
PTX3P26022 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.63□□□□□ -0.07
PTX3P26022 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.63□□□□□ -0.07
PTX3P26022 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.63□□□□□ -0.07
PTX3P26022 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.63□□□□□ -0.07
PTX3P26022 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.63□□□□□ -0.07
PTX3P26022 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 MIR8072-201ENST00000614241 80 ntBASIC14.63□□□□□ -0.07
PTX3P26022 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.63□□□□□ -0.07
PTX3P26022 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PTX3P26022 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTX3P26022 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.63□□□□□ -0.07
PTX3P26022 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.63□□□□□ -0.07
PTX3P26022 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 LILRP1-201ENST00000444199 1370 ntBASIC14.62□□□□□ -0.07
PTX3P26022 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 AC023908.3-201ENST00000564211 3047 ntBASIC14.62□□□□□ -0.07
PTX3P26022 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.62□□□□□ -0.07
PTX3P26022 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 AC092552.1-201ENST00000547243 906 ntBASIC14.62□□□□□ -0.07
PTX3P26022 AC123567.1-201ENST00000548294 1261 ntBASIC14.62□□□□□ -0.07
PTX3P26022 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.62□□□□□ -0.07
PTX3P26022 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.62□□□□□ -0.07
PTX3P26022 SPCS2P1-201ENST00000561636 679 ntBASIC14.62□□□□□ -0.07
PTX3P26022 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.62□□□□□ -0.07
PTX3P26022 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 AC120045.2-201ENST00000567334 178 ntBASIC14.62□□□□□ -0.07
PTX3P26022 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.62□□□□□ -0.07
PTX3P26022 LINC02560-201ENST00000596379 459 ntBASIC14.62□□□□□ -0.07
PTX3P26022 TMEM261P1-201ENST00000604899 340 ntBASIC14.62□□□□□ -0.07
PTX3P26022 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 INTS4P2-202ENST00000614726 2019 ntBASIC14.62□□□□□ -0.07
PTX3P26022 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 AL158070.2-201ENST00000623713 1621 ntBASIC14.62□□□□□ -0.07
PTX3P26022 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PTX3P26022 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTX3P26022 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PTX3P26022 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms